On the other hand, it is easier to observe contamination of the o

On the other hand, it is easier to observe contamination of the other three reference strains by checking 5-FU mw the morphology on plate cultures. These results indicate the need for laboratories to review the processes of managing and preserving their control strains and working cultures, to avoid contamination during subculturing process. The phenotypic expression of the altered strains may not be apparent, and the impact of genetic drift may be silent (Ochman & Wilson, 1987) or affect properties such as toxinogenesis (Cryz et al., 1983; Ochman & Davalos, 2006). Moreover, the use of incorrect strains may have significant

impact for laboratories using molecular methods. Additionally, laboratories may wish to reconsider the benefits of single-use quality control materials, such as the LENTICULE discs that have been proven to exhibit no detectable changes (Desai et al., 2006). In summary, FAFLP has been proven as a valuable tool for assessing the genetic variability of isolates that have been preserved by various methods over a period of time. It also highlights the need for laboratories to validate their working cultures and stock cultures and consider using molecular methods. The authors would like to Metabolism inhibitor thank to Dr Barry Holmes for providing archived NCTC

cultures for this study. “
“The taxonomic status of a nitrogen-fixing bacterium, strain MSSRF38T, isolated from the rhizosphere of mangrove-associated wild rice Loperamide (Porteresia coarctata Tateoka), in Pichavaram, India, was studied using a polyphasic approach. Phylogenetic analyses based on 16S rRNA gene sequences indicated that the novel strain MSSRF38T was most closely related to Vibrio ruber DSM 16370T (98.3% gene sequence similarity), Vibrio rhizosphaerae DSM 18581T (98.2% sequence similarity) and <96% to the remaining Vibrio species. Multilocus sequence analysis using ftsZ, gapA, gyrB and mreB genes showed low levels

of gene sequence similarities (82–90%) with all species of the genus Vibrio with validly published names, indicating that strain MSSRF38T occupies a distinct phylogenetic position. DNA–DNA hybridization experiments showed that strain MSSRF38T had <70% DNA–DNA similarity to its closest neighbours V. ruber DSM 16370T (27.4%) and V. rhizosphaerae DSM 18581T (12.1%). Strain MSSRF38T could be differentiated from its relatives on the basis of several phenotypic characteristics. The major fatty acids were feature 3 (including C16:1ω7c and/or C15:0 iso 2-OH), C16:0, C18:1ω7c, C14:0 and C12:0. The DNA G+C content was 45.4 mol%. Based on genotypic, phenotypic, chemotaxonomic and DNA–DNA analyses, the name Vibrio mangrovi sp. nov. (type strain MSSRF38T=LMG 24290T=DSM 19641T) is proposed for this novel taxon.

The inability to utilize nitrogen sources from carrot agar may ha

The inability to utilize nitrogen sources from carrot agar may have resulted in immature ΔareA ascospores. The total nitrogen content of carrots agar is low, and the major nitrogen compounds

are nitrate and proteins, which ΔareA strains cannot use (Międzobrodzka et al., 1993; U.S. Department of Agriculture, 2010). When we supplemented carrot agar with 5 mM urea, the sexual development of ΔareA strains was restored to the level of the wild-type strain, suggesting that the deletion mutants exhausted all available nitrogen sources during early sexual development and therefore could not complete development. In conclusion, the global nitrogen regulator areA is required for nitrogen metabolism, virulence, secondary metabolism, vegetative Selleckchem Sunitinib growth, and sexual development in G. zeae. This study is the Obeticholic Acid cell line first report to account for the functions of an areA orthologue in sexual development of filamentous fungi. The detailed mechanisms of how areA regulates fungal development with other regulators would be exciting topics for future studies of G. zeae. This work was supported by a grant (2012-0000575) by the National Research Foundation funded by the Korean government (MEST). “
“Plant pathogens usually promote pathogenesis

by secreting effector proteins into host plant cells. One of the secreted effectors of Pseudomonas syringae pv. phaseolicola, the causative agent of halo-blight disease in common bean (Phaseolus vulgaris), HopF1, activates effector-triggered immunity (ETI) in a bean cultivar containing R1 resistance gene, but displays

virulence function in a bean cultivar without the R1 gene. The virulence mechanism of the effector remained Vasopressin Receptor unknown, although it was identified more than a decade ago. Here we demonstrated that HopF1 can inhibit pathogen-associated molecular pattern-triggered immunity (PTI) in a susceptible bean cultivar Tendergreen. HopF1 directly interacted with two RPM1-interacting protein 4 (RIN4) orthologs of bean, PvRIN4a and PvRIN4b. Like RIN4 in Arabidopsis, both PvRIN4 orthologs negatively regulated the PTI responses in bean. However, the virulence function of HopF1 was enhanced in Tendergreen silencing PvRIN4. Furthermore, silencing PvRIN4a compromised the avrβ1-induced hypersensitive response (HR), which previously was reported to be suppressed by HopF1. Together, these results demonstrated that PvRIN4 orthologs were not the virulence target of HopF1 for inhibiting PTI, but probably for interfering with ETI. Plant pathogens usually employ a type III secretion system to deliver type III secreted effectors (T3SEs) into plant cells, where they interact directly with host substrates to modulate defense pathways and promote disease. Plants rely on an elaborate immune system to counteract pathogens (Boller & He, 2009).

In STARTMRK, treatment-naïve patients received raltegravir 400 mg

In STARTMRK, treatment-naïve patients received raltegravir 400 mg bid or efavirenz 600 mg at bedtime (in a 1:1 ratio), both in combination with tenofovir/emtricitabine [11,12]. In BENCHMRK-1 and -2, highly treatment-experienced patients with multi-drug resistant virus and virological failure received raltegravir 400 mg bid or placebo (in a 2:1 ratio), both in combination with

optimized Roscovitine in vitro background therapy (OBT) [13,14]. Patients with chronic HBV and/or HCV coinfection were purposely permitted to enrol if their baseline levels of aspartate aminotransferase (AST), alanine aminotransferase (ALT) and alkaline phosphatase did not exceed five times the upper limit of normal; treatment-experienced patients were also required to have baseline total bilirubin less than twice the upper limit of normal. HBV infection was defined as HBV surface antigen positivity for all studies; HCV infection was defined as HCV RNA

positivity for patients in STARTMRK and as HCV antibody positivity for patients in BENCHMRK. All treated patients were included in the safety and efficacy analyses. For the safety analyses, overall categories of clinical adverse events and selected laboratory abnormalities were tabulated. Adverse events were reported as drug-related if they were judged by the investigator as definitely, probably, or possibly related to any of the study drugs. The severity of laboratory AG-014699 cell line Sulfite dehydrogenase abnormalities was graded according to the 1992 Division of AIDS toxicity guidelines for adults (http://rcc.tech-res-intl.com/tox_tables.htm).

The percentage of patients with a particular laboratory abnormality was calculated as: (number of patients whose highest on-treatment value was a worsened grade from baseline)/(number of patients with a baseline value and at least one on-treatment value). For the BENCHMRK studies, adverse events and laboratory abnormalities are presented in two ways: by frequency and by crude adjustment for duration of follow-up, as the median duration of therapy was substantially greater in the raltegravir group as a result of lower rates of virological failure. A logistic regression model was used to compare virological response rates between treatment groups after adjusting for covariates that might affect the likelihood of achieving HIV-1 RNA suppression. An observed failure approach was used for the exploratory efficacy analyses because it predominantly reflects the antiretroviral effect of treatment; only patients discontinuing the studies because of a lack of efficacy were counted as failures at subsequent time-points. These exploratory subgroup analyses were not specified in the original protocols; formal statistical comparisons between groups were not performed. A total of 743 patients received raltegravir and 519 received comparator across the three studies (Table 1).

, 1997; Roberts, 2000) Expression levels of the genes located at

, 1997; Roberts, 2000). Expression levels of the genes located at the nan cluster, involved in the catabolism of sialic acid, were also higher at 37 °C (Table 2). N-Acetylneuraminic acid (Neu5Ac) has been identified as the sole inducer of the nan operon in E. coli (Vimr & Troy, 1985a). Our results indicate that temperature also regulates its transcription in E. coli K92. The highest expression value observed for nanA at 37 °C could be related to the dual role of NanA protein (N-acetylneuraminate

lyase) in sialic acid metabolism through the synthesis of Neu5Ac for the formation of PA (Rodríguez-Aparicio et al., 1995; Ferrero et al., 1996; Ferrero & Rodríguez-Aparicio, 2010). The small increase in the expression of the negative regulator of transcription of

the nan operon, nanR, may not be sufficient to repress Compound C price the transcription of the genes of this operon when E. coli K92 is grown at 37 °C (see Table 2). We speculate that at this temperature, the intracellular level of Neu5Ac is sufficient to counteract the repressive effect of NanR (Kalivoda et al., 2003). The genes required to produce CA can be coexpressed with those required for the Depsipeptide ic50 synthesis of capsules belonging to groups 2, 3 and 4 (Whitfield, 2006). However, E. coli K92 remains the only wild-type bacterium described as being able to synthesize both PA and CA (González-Clemente et al., 1990; Vimr et al.,

2004; Navasa et al., 2009). Our results show that this bacterium has the genetic machinery to produce both capsular polymers under strict thermoregulation. However, the optimal temperature for CA synthesis gene regulation is 19 °C rather than 37 °C (Table 3), consistent with its maximum production at this temperature (Navasa et al., 2009). These results permit us to establish, for the first time, the existence MycoClean Mycoplasma Removal Kit of a direct relationship between synthesis of both CPSs (CA and PA) and the expression of their respective genes as a specific response to coordinated regulation induced by growth temperature in E. coli K92. Of note, although in both cases the growth temperature seems to be the physical switch that regulates the expression and synthesis of these capsular polymers, the substantial differences observed for cps/wza and kps gene expression levels (Tables 2 and 3) suggest that a post-transcriptional mechanism is also involved. To date, the proposed regulatory models published reveal that the control of PA synthesis is mediated by temperature and occurs at the transcriptional level (Rowe et al., 2000). In the case of CA the regulation also involves a phosphorylation–dephosphorylation process related to the Rcs phosphorelay system and the auxiliary protein RcsA, which could be responsible for post-transcriptional regulation.

, 2010) The disease symptoms include white or grey patches of fi

, 2010). The disease symptoms include white or grey patches of filamentous mycelium on the body or the fins of freshwater fish. The cellular and molecular mechanisms underlying Saprolegnia

infection have not been studied extensively (Kamoun, 2003). Instead, considerably more is known about this website how plant pathogenic oomycetes infect their hosts. Most oomycetes generate asexual zoospores for dispersal, which encyst and germinate when they have reached a potential host. Saprolegnia parasitica is also able to generate both primary and secondary zoospores, whereby the latter type is infectious (Phillips et al., 2008; Bruno et al., 2010). Upon finding a host, some oomycetes form a swelling at the tip of a germ tube, called an appressorium, which forms a penetration peg to enter the host cell (Grenville-Briggs et al., 2008). These appressoria-like structures have not been described so far for S. parasitica. Biotrophic and hemibiotrophic plant pathogenic oomycetes can also generate specialized hyphal branches called haustoria. These are structures that invaginate find more the plant cell and induce the formation of a plant-derived

extrahaustorial membrane with a gel-like layer between the extrahaustorial membrane and the haustorial wall, called the extrahaustorial matrix (Bushnell, 1972; Szabo & Bushnell, 2001). Within this extrahaustorial matrix, water and nutrients are exchanged between the pathogen and the host (Voegele & Mendgen, 2003). The extracellular space is also considered important for the trafficking of secreted proteins from the pathogen, including effector proteins (Ellis et al., 2006). Effector proteins are required to establish a successful infection, but if recognized, they can also trigger a host resistance response (Birch et al., 2006, 2009; Jones & Dangl, Flavopiridol (Alvocidib) 2006; Hogenhout et al., 2009). Some plant and animal pathogens have evolved intriguing molecular

mechanisms to inject or translocate potential effector proteins into their host cells (Coombes et al., 2004; Navarro et al., 2005; Birch et al., 2006; Jones & Dangl, 2006; Whisson et al., 2007). For example, bacterial pathogens can inject effector proteins into the host cytosol using a type-III secretion system, where these effectors can suppress basal/innate immunity, inhibit inflammatory responses, inhibit phagocytosis and induce apoptosis in macrophages (Hueck, 1998; Navarro et al., 2005; Galán & Wolf-Watz, 2006; Lewis et al., 2009). The eukaryotic parasite Plasmodium falciparum, the causative agent of malaria, is also able to translocate secreted proteins that contain a so-called PEXEL motif [amino acid motif RxLx (E, Q or D)] into the cytosol of red blood cells (Hiller et al., 2004; Marti et al., 2004; Hiss et al., 2008). During the blood stages of infection, the parasite invades mature human erythrocytes and develops within a parasitophorous vacuolar membrane.

In both modes, control animals were more likely to use a predicta

In both modes, control animals were more likely to use a predictable lose-switch strategy than animals with lesions of either DMS or DLS. selleck products Animals with lesions of DMS presumably relied more on DLS for behavioural control, and generated repetitive responses in the first mode. These animals then shifted to a random response strategy in the competitive mode, thereby performing better than controls or animals with DLS lesions. Analysis using computational models of reinforcement learning indicated

that animals with striatal lesions, particularly of the DLS, had blunted reward sensitivity and less stochasticity in the choice mechanism. These results provide further evidence that the rodent DLS is involved in rapid response adaptation that is more sophisticated than that embodied by the classic notion of habit formation driven by gradual stimulus–response learning. “
“In neonatal rats, the transection of a peripheral nerve leads to an intense retrograde degeneration of both motor and sensory neurons. Most of the axotomy-induced neuronal

loss is a result of apoptotic processes. The clinical use of neurotrophic factors is difficult due to side effects and elevated costs, but other molecules might be effective and more easily obtained. Among them, some are derived from Cannabis sativa. Cannabidiol selleck chemicals (CBD) is the major non-psychotropic component found on the surface of such plant leaves. The present study aimed to investigate the neuroprotective potential of CBD. Thus, 2-day-old

Wistar rats were divided into the following experimental groups: sciatic nerve axotomy + CBD treatment (CBD group), axotomy + vehicle treatment (phosphate buffer group) and a control group (no-treatment RANTES group). The results were analysed by Nissl staining, immunohistochemistry and terminal deoxynucleotidyl transferase dUTP nick end labeling at 5 days post-lesion. Neuronal counting revealed both motor and sensory neuron rescue following treatment with CBD (15 and 30 mg/kg). Immunohistochemical analysis (obtained by synaptophysin staining) revealed 30% greater synaptic preservation within the spinal cord in the CBD-treated group. CBD administration decreased the astroglial and microglial reaction by 30 and 27%, respectively, as seen by glial fibrillary acidic protein and ionised calcium binding adaptor molecule 1 immunolabeling quantification. In line with such results, the terminal deoxynucleotidyl transferase dUTP nick end labeling reaction revealed a reduction of apoptotic cells, mostly located in the spinal cord intermediate zone, where interneurons promote sensory–motor integration. The present results show that CBD possesses neuroprotective characteristics that may, in turn, be promising for future clinical use. “
“Pain can be modulated by several contextual factors.

For phenanthrene, growth-positive wells were determined photometr

For phenanthrene, growth-positive wells were determined photometrically, at 450 nm, with a reference wavelength of 630 nm, after a 5-h incubation at 20 °C with the tetrazolium compound WST-1 with a threshold limit of 0.050. Negative control plates contained no hydrocarbons. Soil (2.5 g) was transferred to 100-mL airtight glass flasks

and 100 μL of acetone stock solutions containing a mixture of [9-14C]-labelled phenanthrene (8.2 mCi mmol−1, radiochemical purity 97.7%; Sigma-Aldrich, MI) and analytical-grade phenanthrene (>98% purity; Merck, Darmstadt, Germany) were added to each flask as described by Brinch et al. (2002). The flasks were left open in a laminar flowbench for 1 h, allowing the acetone www.selleckchem.com/products/Verteporfin(Visudyne).html to evaporate before transfer of 7.5 g soil and 0.5 mL sterile tap water, yielding final phenanthrene concentrations of 1 mg kg−1 soil and approximately 15 000 d.p.m. of the [14C]-labelled Fluorouracil supplier tracers per flask. The aerobic mineralization to 14CO2 was monitored by inserting a CO2 trap, consisting of a 10-ml glass tube containing 2 mL 0.5 M NaOH, into each flask. At incubation temperatures below 0 °C, the base solution was changed to 2 M NaOH to prevent freezing of the CO2 trap during incubation. The NaOH was replaced

at regular intervals in a laminar flow bench and mixed with 10 mL of Wallac OptiPhase HiSafe 3 scintillation cocktail (Turku, Finland) and the radioactivity was determined by counting for 10 min in a Wallac 1409 liquid scintillation counter. [14C-U-ring]benzoic acid (specific Selleck Palbociclib activity 6.2 mCi mmol−1, radiochemical purity 99.5%; Sigma-Aldrich, MI) mixed with unlabelled benzoic acid (99.5% purity; Sigma-Aldrich, Munich, Germany) was added to separate flasks for measurement of aromatic degradative activity and it was added directly to the soils in a sterile water stock solution, yielding a final concentration of 1 mg kg−1 soil and approximately 20 000 d.p.m. per flask. All experiments were performed in triplicate and the results were correlated for quenching and background radioactivity. The most diluted growth-positive wells from the phenanthrene MPN plates with contaminated

soils were used to prepare Bacteria 16S rRNA gene clones. Five hundred microlitres were sampled from five positive MPN wells and total community DNA was extracted using the UltraClean Microbial DNA Isolation Kit (MO BIO Laboratories Inc.). Bacterial 16S rRNA genes were amplified from the DNA extracts by PCR with the primers 27f and 1492r (Lane, 1991). The reagents used in the 25 μL PCR were as follows: PuReTaq™ Ready-To-Go™ beads (GE Healthcare, UK), 0.125 μL of each primer (10 pmol μL−1) and 1 μL template DNA. The temperature program for PCR was as follows: initial denaturation step of 10 min at 95 °C, followed by 30 cycles at 95 °C for 45 s and 55 °C for 45 s, followed by 72 °C for 90 s, and a final extension of 72 °C for 7 min.

The mcnR

gene has one difference

The mcnR

gene has one difference PD-0332991 research buy from the previously reported mdbA gene (O’Brien & Mahanty, 1994), which produces a frameshift in translation of the last 43 amino acids, alsoshortening the protein in 27 amino acids. The mcnI gene is identical to the previously reported MtfI immunity gene (93 amino acids). The polypeptide encoded possesses 43% identity and 72% similarity to MceB, the immunity protein of microcin E492. The expression of mcnI gene from a plasmid (pIN) was sufficient to confer immunity against microcin N, proving unambiguously its function as an immunity protein (data not shown). Transmembrane domain prediction of McnI and MceB using sosui (Hirokawa et al., 1998), tmpred (Hofmann Selleckchem Screening Library & Stoffel, 1993), and predictprotein (Rost et al., 2004) showed that both proteins have three

high-score transmembrane helices with the amino terminal exposed to the periplasm. Both proteins show high identity in transmembrane regions, but not in the nonhomologous regions located in the loops. This suggests similar mechanisms of immunity through an interaction with host proteins (Lagos et al., 2009) by the transmembrane regions and specific recognition of its cognate microcin by the periplasmic loops. This may explain why, despite their high similarity, microcin E492 and microcin N producers do not have cross-immunity (Sable et al., 2003). The mcnN gene encodes for the microcin N polypeptide. This polypeptide is synthesized as a prepolypeptide of 89 amino acids. The mcnN gene has three insertions with respect to the previously reported gene mtfS; these resulted in major changes in the sequence of the encoded polypeptide. The insertions in mcnN produce changes in a region of 10 amino acids located in the N-terminal domain of MtfS. This region has been involved in the toxic activity in other Gram-negative pore-forming microcins (Azpiroz

& Laviña, 2007). Processed microcin N has a deduced mass of 7221.9 Da and shares 63% of identity and 73% of similarity with the mature microcin E492. Microcin N, unlike microcin E492, lacks the C-terminal serine-rich MycoClean Mycoplasma Removal Kit region that serves as a signal for the posttranslational modification with salmochelin (Azpiroz & Laviña, 2007). Salmochelin is required for the recognition and import of microcin E492 through the catecholic receptors FepA, Fiu, and Cir (Strahsburger et al., 2005; Fischbach et al., 2006). The absence of this serine-rich region and the modifying enzymes explain the sensitivity of E. coli H1876 – a triple mutant for the catecholic receptors – to microcin N (data not shown). The production of microcin N by E. coli MC4100 pGOB18 was analyzed during the different stages of bacterial growth in Nut, LB, MH broth, and M63 (Fig. 2). It was established that E. coli MC4100 pGOB18 begins to produce microcin N during the exponential phase, when the culture has reached an OD600 nm>0.4 (approximately at 4–5 h of growth).

, 2002), and yet in RRSA16, marked vancomycin resistance emerged

, 2002), and yet in RRSA16, marked vancomycin resistance emerged with ramoplanin resistance. Limited access to lipid II via restricted diffusion through the thickened cell wall to the outer membrane or by decoy titration through the overproduction of peptidoglycan precursors containing

an intact pyrophosphate may explain the parallel resistance phenotypes observed. Because antibiotic susceptibility is significantly restored in the strain R16-18d, it is likely that a significant subset of events leading to ramoplanin-resistant phenotype is transcriptionally controlled. We also determined that RRSA16 had increased resistance to the lantibiotic nisin (Table 2). The site of nisin action is lipid II, and similar to ramoplanin, nisin binding requires the pyrophosphate moiety (Bonev et al., 2004; Hsu et al., 2004). However, the primary mechanism of nisin Pexidartinib manufacturer action is not by substrate inhibition of transglycosylation; rather, stable pores composed of nisin and lipid II molecules are formed in the bacterial membrane, resulting in lysis (Brotz et al., 1998; Breukink et al., 1999, 2003; van Heusden et al., 2002; Hasper et al., 2004). Decreased S. aureus susceptibility to nisin and other cationic peptide antimicrobials is confirmed by increased selleck inhibitor expression of the dlt operon resulting

in increased d-alanylation of teichoic acids, resulting in a more cationic cell envelope (Peschel et al., 1999; Sass & Bierbaum, 2009). Increased d-alanylation of teichoic selleck products acids may influence susceptibility to ramoplanin as it is a cationic peptide, requiring ornithine at position 10 for molecular recognition of the lipid II pyrophosphate via an electrostatic interaction (Cudic et al., 2002; Nam et al., 2007). Furthermore, alteration of the teichoic acid structure is known to modulate autolysin activity (Fedtke et al., 2007). Because ramoplanin and nisin each bind the pyrophosphate moiety of lipid II and are both cationic, one hypothesis is that some component of the adaptations and mutations generated by serial passage in ramoplanin may have altered the ability of cationic peptides to associate with lipid II and/or the cell envelope. Further

study of RRSA16 and R16-18d should provide an insight into the molecular mechanism of ramoplanin resistance in S. aureus and may lead to strategies for the prevention of antimicrobial resistance during clinical use. This work was generously supported by US Public Health Service grant AI46611 from the National Institutes of Health to D.G.M. “
“Bartonella henselae is an emerging gram-negative facultative intracellular pathogen transmitted via Ctenocephalides felis (cat fleas) or cat scratches. Bartonellosis is present mainly in the form of cat scratch disease (CSD), bacillary angiomatosis and infective endocarditis (IE). The methods used to diagnose B. henselae rely on culturing, immunofluorescent assays and molecular techniques.

Although we were not able to assess event rates beyond 3 years of

Although we were not able to assess event rates beyond 3 years of having ceased

smoking, our results Selleck VE-821 show that the clinical benefits observed in the general HIV-negative population are also seen in HIV-positive patients. Unlike the CVD endpoints, we did not observe a decrease in the mortality rates for patients who stopped smoking during follow-up. Even when we restricted our analysis to those >50 years old, a population at increased risk of the detrimental effects of smoking, mortality rates did not decrease with passing years of having stopped smoking. These findings are in contrast to those reported in the literature for the general population both for all-cause mortality and for specific causes of death [24,26,27]. One possible explanation for our findings is that some patients who stopped smoking following diagnosis of a serious illness such as lung cancer may have stopped smoking too late to benefit from it. We do not collect reasons for stopping smoking, and also have only just begun collecting information on other serious non-AIDS-related endpoints such as non-AIDS-related malignancies, and so were not able to attempt to adjust for this bias. We were, however, able to summarize data on causes of death to assess this. We found that a larger proportion of previous smokers and those who stopped smoking during follow-up died from non-AIDS-related malignancies

compared with never smokers, while a larger proportion of never smokers died from HIV/AIDS compared with all the smoking groups. This lends some support to the notion Z-VAD-FMK clinical trial that some patients who died probably stopped smoking at too late a stage of their illness to benefit (-)-p-Bromotetramisole Oxalate from stopping. It is also notable that most reported causes of death were not directly associated with smoking, suggesting that we might have missed a reduction in smoking-related mortality because of competing risks. We did assess reductions in CVD-related mortality only, but did not see any clear reduction, perhaps because of the relatively small numbers of CVD-related deaths. It may

be that this issue will become clearer with further follow-up in D:A:D, and the recent inclusion of data on serious non-AIDS-related endpoints. The question of whether the rates of CVD in HIV-positive patients return to levels observed in nonsmokers after 5 or more years, as observed in the general population, remains unanswered. Indeed, although we observed a decrease in CVD on stopping smoking that is qualitatively similar to the trends seen in HIV-negative populations, making exact quantitative comparisons is not possible. There are a number of limitations to our analyses. First, we do not collect start or stop dates for smoking, and also do not collect data on smoking exposure such as pack-years. We were therefore only able to determine the time since stopping smoking with any accuracy for patients who reported stopping smoking during follow-up.